Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Mrpl55Q9CZ83 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Mrpl55Q9CZ83 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Mrpl55Q9CZ83 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Gm8520-201ENSMUST00000186517 868 ntBASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Rab3c-203ENSMUST00000224180 967 ntBASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Mrpl55Q9CZ83 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Gm10653-202ENSMUST00000139570 835 ntBASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl55Q9CZ83 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms