Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.19■□□□□ 0.82
Smc3Q9CW03 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Smc3Q9CW03 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.18■□□□□ 0.82
Smc3Q9CW03 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Smc3Q9CW03 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Smc3Q9CW03 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.18■□□□□ 0.82
Smc3Q9CW03 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc3Q9CW03 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.17■□□□□ 0.82
Smc3Q9CW03 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.17■□□□□ 0.82
Smc3Q9CW03 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc3Q9CW03 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Gm13158-201ENSMUST00000122007 736 ntBASIC20.16■□□□□ 0.82
Smc3Q9CW03 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc3Q9CW03 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.15■□□□□ 0.82
Smc3Q9CW03 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.15■□□□□ 0.82
Smc3Q9CW03 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.15■□□□□ 0.82
Smc3Q9CW03 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc3Q9CW03 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc3Q9CW03 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Smc3Q9CW03 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.14■□□□□ 0.81
Smc3Q9CW03 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc3Q9CW03 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.13■□□□□ 0.81
Smc3Q9CW03 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms