Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Cldnd1Q9CQX5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Gm1401-201ENSMUST00000122048 772 ntBASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Gm6376-201ENSMUST00000209407 580 ntBASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldnd1Q9CQX5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Mir8112-201ENSMUST00000184382 131 ntBASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldnd1Q9CQX5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Gm11594-201ENSMUST00000122313 162 ntBASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Mir5131-201ENSMUST00000175426 93 ntBASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cldnd1Q9CQX5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldnd1Q9CQX5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldnd1Q9CQX5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Gm13186-201ENSMUST00000118031 316 ntBASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Gm27000-201ENSMUST00000182943 842 ntBASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldnd1Q9CQX5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms