Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Gm17661-201ENSMUST00000170317 270 ntBASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.24■□□□□ 0.35
Retreg3Q9CQV4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retreg3Q9CQV4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Gm7791-201ENSMUST00000219066 539 ntBASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Retreg3Q9CQV4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Gm9731-201ENSMUST00000209480 747 ntBASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retreg3Q9CQV4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retreg3Q9CQV4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retreg3Q9CQV4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retreg3Q9CQV4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retreg3Q9CQV4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retreg3Q9CQV4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retreg3Q9CQV4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms