Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.55■□□□□ 0.72
Trim11Q99PQ2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Gm24841-201ENSMUST00000158676 357 ntBASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim11Q99PQ2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim11Q99PQ2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim11Q99PQ2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Gm10698-201ENSMUST00000182663 604 ntBASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim11Q99PQ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Gm20760-201ENSMUST00000179197 648 ntBASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim11Q99PQ2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim11Q99PQ2 Gm10653-202ENSMUST00000139570 835 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms