Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.99■□□□□ 0.31
Trim33Q99PP7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim33Q99PP7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.98■□□□□ 0.31
Trim33Q99PP7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim33Q99PP7 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.98■□□□□ 0.31
Trim33Q99PP7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim33Q99PP7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim33Q99PP7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Gm8969-201ENSMUST00000199694 526 ntBASIC16.96■□□□□ 0.31
Trim33Q99PP7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim33Q99PP7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim33Q99PP7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim33Q99PP7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim33Q99PP7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.95■□□□□ 0.3
Trim33Q99PP7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms