Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf2ird2Q99NI3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf2ird2Q99NI3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf2ird2Q99NI3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf2ird2Q99NI3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Gtf2ird2Q99NI3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.62■□□□□ 0.41
Gtf2ird2Q99NI3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf2ird2Q99NI3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf2ird2Q99NI3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms