Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col25a1Q99MQ5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col25a1Q99MQ5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col25a1Q99MQ5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col25a1Q99MQ5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Gm5745-201ENSMUST00000183748 313 ntBASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Grk6-206ENSMUST00000224995 2971 ntBASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.76■□□□□ 0.43
Col25a1Q99MQ5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Gm10566-201ENSMUST00000086739 996 ntBASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col25a1Q99MQ5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Gm4974-201ENSMUST00000209974 875 ntBASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col25a1Q99MQ5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Gm12260-201ENSMUST00000122447 411 ntBASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Col25a1Q99MQ5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Gm14494-201ENSMUST00000118786 435 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Gm27000-201ENSMUST00000182943 842 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Gm6296-201ENSMUST00000222599 943 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col25a1Q99MQ5 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col25a1Q99MQ5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms