Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf111Q99ML9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf111Q99ML9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Rnf111Q99ML9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf111Q99ML9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Mir8112-201ENSMUST00000184382 131 ntBASIC16.63■□□□□ 0.25
Rnf111Q99ML9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf111Q99ML9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.62■□□□□ 0.25
Rnf111Q99ML9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Gm10138-203ENSMUST00000206952 366 ntBASIC16.62■□□□□ 0.25
Rnf111Q99ML9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf111Q99ML9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf111Q99ML9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms