Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd2Q99JR8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd2Q99JR8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Gm34391-201ENSMUST00000203706 907 ntBASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd2Q99JR8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smarcd2Q99JR8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Gm13186-201ENSMUST00000118031 316 ntBASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Birc2-201ENSMUST00000054878 378 ntBASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd2Q99JR8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd2Q99JR8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Grk6-206ENSMUST00000224995 2971 ntBASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Mzt1-203ENSMUST00000227948 952 ntBASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcd2Q99JR8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms