Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdk9Q99J95 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.29■□□□□ 0.36
Cdk9Q99J95 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk9Q99J95 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.28■□□□□ 0.36
Cdk9Q99J95 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Gm6420-201ENSMUST00000193885 723 ntBASIC17.28■□□□□ 0.36
Cdk9Q99J95 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdk9Q99J95 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cdk9Q99J95 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk9Q99J95 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Nespas-201ENSMUST00000143738 1083 ntBASIC17.26■□□□□ 0.35
Cdk9Q99J95 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Cdk9Q99J95 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms