Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Gm5417-201ENSMUST00000079706 384 ntBASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha3Q91Y16 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha3Q91Y16 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Gm3375-201ENSMUST00000203929 796 ntBASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha3Q91Y16 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha3Q91Y16 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha3Q91Y16 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms