Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Gm43799-201ENSMUST00000201845 579 ntBASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb22Q91XZ8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb22Q91XZ8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb22Q91XZ8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb22Q91XZ8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb22Q91XZ8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Gm27000-201ENSMUST00000182943 842 ntBASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Gm2274-201ENSMUST00000184539 609 ntBASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb22Q91XZ8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb22Q91XZ8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb22Q91XZ8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb22Q91XZ8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb22Q91XZ8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb22Q91XZ8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb22Q91XZ8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb22Q91XZ8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms