Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx39aQ8VDW0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.08■□□□□ 0.65
Ddx39aQ8VDW0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx39aQ8VDW0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx39aQ8VDW0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ddx39aQ8VDW0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx39aQ8VDW0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx39aQ8VDW0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Gm7284-201ENSMUST00000131667 944 ntBASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx39aQ8VDW0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Gm26039-201ENSMUST00000158152 144 ntBASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Gm5587-201ENSMUST00000206270 674 ntBASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx39aQ8VDW0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx39aQ8VDW0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx39aQ8VDW0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Gm9013-201ENSMUST00000132939 882 ntBASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms