Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uhrf1Q8VDF2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uhrf1Q8VDF2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Uhrf1Q8VDF2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Uhrf1Q8VDF2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 AW822252-206ENSMUST00000208904 237 ntBASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Uhrf1Q8VDF2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Uhrf1Q8VDF2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Gm15372-201ENSMUST00000120729 834 ntBASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms