Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup35Q8R4R6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14□□□□□ -0.17
Nup35Q8R4R6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nup35Q8R4R6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14□□□□□ -0.17
Nup35Q8R4R6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nup35Q8R4R6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup35Q8R4R6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nup35Q8R4R6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Gm7291-201ENSMUST00000199147 382 ntBASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Gm10033-202ENSMUST00000211874 928 ntBASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms