Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cuedc1Q8R3V6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cuedc1Q8R3V6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cuedc1Q8R3V6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.58■□□□□ 0.09
Cuedc1Q8R3V6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cuedc1Q8R3V6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.58■□□□□ 0.09
Cuedc1Q8R3V6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cuedc1Q8R3V6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Gm22697-201ENSMUST00000175194 63 ntBASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cuedc1Q8R3V6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cuedc1Q8R3V6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cuedc1Q8R3V6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cuedc1Q8R3V6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cuedc1Q8R3V6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cuedc1Q8R3V6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cuedc1Q8R3V6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cuedc1Q8R3V6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms