Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubqln1Q8R317 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubqln1Q8R317 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubqln1Q8R317 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubqln1Q8R317 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.27■□□□□ 0.19
Ubqln1Q8R317 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubqln1Q8R317 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubqln1Q8R317 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ubqln1Q8R317 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubqln1Q8R317 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubqln1Q8R317 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Mir7071-201ENSMUST00000184847 69 ntBASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubqln1Q8R317 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubqln1Q8R317 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms