Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c5Q8R2T8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Gtf3c5Q8R2T8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Gm17661-201ENSMUST00000170317 270 ntBASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf3c5Q8R2T8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c5Q8R2T8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Il3ra-202ENSMUST00000223589 738 ntBASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c5Q8R2T8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c5Q8R2T8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Gtf3c5Q8R2T8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c5Q8R2T8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c5Q8R2T8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c5Q8R2T8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c5Q8R2T8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms