Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc12Q8K5B8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc12Q8K5B8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxc12Q8K5B8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Hoxc12Q8K5B8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc12Q8K5B8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc12Q8K5B8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Gm18959-201ENSMUST00000208954 655 ntBASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc12Q8K5B8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Il3ra-202ENSMUST00000223589 738 ntBASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc12Q8K5B8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Gm13474-201ENSMUST00000122466 815 ntBASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc12Q8K5B8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Gm7638-201ENSMUST00000121348 967 ntBASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Gm16061-201ENSMUST00000122167 857 ntBASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.34□□□□□ -0.11
Hoxc12Q8K5B8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms