Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Psmb5-202ENSMUST00000227257 622 ntBASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ddx54Q8K4L0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gm13186-201ENSMUST00000118031 316 ntBASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gm15165-201ENSMUST00000118140 502 ntBASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gm13312-201ENSMUST00000119631 718 ntBASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx54Q8K4L0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Gm27397-201ENSMUST00000184997 107 ntBASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 BC021767-201ENSMUST00000126387 1716 ntBASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx54Q8K4L0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Gm14822-201ENSMUST00000122247 291 ntBASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Gm24513-201ENSMUST00000174964 138 ntBASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx54Q8K4L0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx54Q8K4L0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Gm4995-201ENSMUST00000117247 432 ntBASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 AC225888.1-201ENSMUST00000227184 728 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms