Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Trmt13-210ENSMUST00000198454 880 ntBASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cchcr1Q8K2I2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Gm37856-201ENSMUST00000191634 999 ntBASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Gm10517-202ENSMUST00000192970 758 ntBASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.29■□□□□ 0.84
Cchcr1Q8K2I2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cchcr1Q8K2I2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cchcr1Q8K2I2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cchcr1Q8K2I2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cchcr1Q8K2I2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cchcr1Q8K2I2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cchcr1Q8K2I2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Gm12527-201ENSMUST00000117967 564 ntBASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cchcr1Q8K2I2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Gm24841-201ENSMUST00000158676 357 ntBASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Gm43183-201ENSMUST00000200632 547 ntBASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cchcr1Q8K2I2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms