Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Gm7367-201ENSMUST00000057611 492 ntBASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Depdc1aQ8CIG0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Depdc1aQ8CIG0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1aQ8CIG0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1aQ8CIG0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Gm10819-201ENSMUST00000099988 561 ntBASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1aQ8CIG0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1aQ8CIG0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1aQ8CIG0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms