Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm28Q8CGC6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm28Q8CGC6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm28Q8CGC6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbm28Q8CGC6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Gm22697-201ENSMUST00000175194 63 ntBASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm28Q8CGC6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rbm28Q8CGC6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rbm28Q8CGC6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rbm28Q8CGC6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 AA414768-201ENSMUST00000121924 1257 ntBASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Gm21362-201ENSMUST00000194272 928 ntBASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Gm37025-201ENSMUST00000195159 829 ntBASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Gm9731-201ENSMUST00000209480 747 ntBASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm28Q8CGC6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.25■□□□□ 0.83
Rbm28Q8CGC6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Gm13474-201ENSMUST00000122466 815 ntBASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm28Q8CGC6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Gm6345-202ENSMUST00000180900 204 ntBASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms