Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.32■□□□□ 0.04
ShfQ8CG80 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Gm4974-201ENSMUST00000209974 875 ntBASIC15.31■□□□□ 0.04
ShfQ8CG80 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ShfQ8CG80 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShfQ8CG80 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.31■□□□□ 0.04
ShfQ8CG80 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ShfQ8CG80 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.3■□□□□ 0.04
ShfQ8CG80 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.3■□□□□ 0.04
ShfQ8CG80 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ShfQ8CG80 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShfQ8CG80 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ShfQ8CG80 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ShfQ8CG80 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ShfQ8CG80 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ShfQ8CG80 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.29■□□□□ 0.04
ShfQ8CG80 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.29■□□□□ 0.04
ShfQ8CG80 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ShfQ8CG80 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShfQ8CG80 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.28■□□□□ 0.04
ShfQ8CG80 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
ShfQ8CG80 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShfQ8CG80 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShfQ8CG80 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShfQ8CG80 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ShfQ8CG80 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ShfQ8CG80 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ShfQ8CG80 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShfQ8CG80 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ShfQ8CG80 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ShfQ8CG80 Gm42545-201ENSMUST00000202755 922 ntBASIC15.27■□□□□ 0.04
ShfQ8CG80 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.27■□□□□ 0.04
ShfQ8CG80 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ShfQ8CG80 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.27■□□□□ 0.03
ShfQ8CG80 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ShfQ8CG80 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms