Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.24■□□□□ 0.99
Smc5Q8CG46 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Gm4974-201ENSMUST00000209974 875 ntBASIC21.24■□□□□ 0.99
Smc5Q8CG46 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.24■□□□□ 0.99
Smc5Q8CG46 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Dancr-204ENSMUST00000132389 2347 ntBASIC21.24■□□□□ 0.99
Smc5Q8CG46 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smc5Q8CG46 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Gm13158-201ENSMUST00000122007 736 ntBASIC21.23■□□□□ 0.99
Smc5Q8CG46 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Gm37292-201ENSMUST00000192062 758 ntBASIC21.23■□□□□ 0.99
Smc5Q8CG46 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.23■□□□□ 0.99
Smc5Q8CG46 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc5Q8CG46 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc5Q8CG46 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.21■□□□□ 0.99
Smc5Q8CG46 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc5Q8CG46 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
Smc5Q8CG46 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smc5Q8CG46 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.2■□□□□ 0.98
Smc5Q8CG46 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.2■□□□□ 0.98
Smc5Q8CG46 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Smc5Q8CG46 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Gm24841-201ENSMUST00000158676 357 ntBASIC21.19■□□□□ 0.98
Smc5Q8CG46 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms