Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf31Q8CCF0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Prpf31Q8CCF0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Gm18101-201ENSMUST00000215769 548 ntBASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf31Q8CCF0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.74■□□□□ 0.59
Prpf31Q8CCF0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf31Q8CCF0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Gm23634-201ENSMUST00000175071 91 ntBASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Prpf31Q8CCF0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Gm7213-201ENSMUST00000215977 950 ntBASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf31Q8CCF0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Prpf31Q8CCF0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.71■□□□□ 0.58
Prpf31Q8CCF0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms