Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Gm6365-201ENSMUST00000054711 744 ntBASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Flg-201ENSMUST00000050758 1488 ntBASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.4■□□□□ 0.06
Lysmd4Q8CC84 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Gm11643-201ENSMUST00000119578 864 ntBASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd4Q8CC84 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Gm6211-202ENSMUST00000167849 925 ntBASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lysmd4Q8CC84 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Gm18284-201ENSMUST00000172604 624 ntBASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lysmd4Q8CC84 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms