Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.6■□□□□ 0.25
SynpoQ8CC35 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SynpoQ8CC35 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.6■□□□□ 0.25
SynpoQ8CC35 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.6■□□□□ 0.25
SynpoQ8CC35 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.6■□□□□ 0.25
SynpoQ8CC35 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Gm9987-201ENSMUST00000069768 567 ntBASIC16.59■□□□□ 0.25
SynpoQ8CC35 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SynpoQ8CC35 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SynpoQ8CC35 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SynpoQ8CC35 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SynpoQ8CC35 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SynpoQ8CC35 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Gm30025-201ENSMUST00000218555 728 ntBASIC16.58■□□□□ 0.24
SynpoQ8CC35 Timm23-208ENSMUST00000226683 750 ntBASIC16.58■□□□□ 0.24
SynpoQ8CC35 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SynpoQ8CC35 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Gm6433-201ENSMUST00000118634 875 ntBASIC16.57■□□□□ 0.24
SynpoQ8CC35 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Gm21814-202ENSMUST00000203277 873 ntBASIC16.57■□□□□ 0.24
SynpoQ8CC35 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.57■□□□□ 0.24
SynpoQ8CC35 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.57■□□□□ 0.24
SynpoQ8CC35 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.57■□□□□ 0.24
SynpoQ8CC35 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.57■□□□□ 0.24
SynpoQ8CC35 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SynpoQ8CC35 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
SynpoQ8CC35 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Gm43799-201ENSMUST00000201845 579 ntBASIC16.56■□□□□ 0.24
SynpoQ8CC35 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Odf3b-204ENSMUST00000227834 930 ntBASIC16.56■□□□□ 0.24
SynpoQ8CC35 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SynpoQ8CC35 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms