Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim9Q8C7M3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.91■□□□□ 0.62
Trim9Q8C7M3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Gm3375-201ENSMUST00000203929 796 ntBASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim9Q8C7M3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim9Q8C7M3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Trim9Q8C7M3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Il3ra-202ENSMUST00000223589 738 ntBASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim9Q8C7M3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim9Q8C7M3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms