Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col6a6Q8C6K9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col6a6Q8C6K9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col6a6Q8C6K9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col6a6Q8C6K9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col6a6Q8C6K9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col6a6Q8C6K9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.4■□□□□ 0.06
Col6a6Q8C6K9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a6Q8C6K9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms