Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpne1Q8C166 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpne1Q8C166 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.03■□□□□ 0.16
Cpne1Q8C166 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.03■□□□□ 0.16
Cpne1Q8C166 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne1Q8C166 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.02■□□□□ 0.16
Cpne1Q8C166 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne1Q8C166 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.02■□□□□ 0.15
Cpne1Q8C166 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne1Q8C166 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne1Q8C166 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne1Q8C166 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Cpne1Q8C166 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne1Q8C166 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cpne1Q8C166 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne1Q8C166 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cpne1Q8C166 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne1Q8C166 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne1Q8C166 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cpne1Q8C166 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne1Q8C166 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne1Q8C166 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms