Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm18958-201ENSMUST00000174258 762 ntBASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk5rap1Q8BTW8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm21559-201ENSMUST00000220638 855 ntBASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm8587-201ENSMUST00000076538 843 ntBASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cdk5rap1Q8BTW8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cdk5rap1Q8BTW8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdk5rap1Q8BTW8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.27■□□□□ 0.19
Cdk5rap1Q8BTW8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk5rap1Q8BTW8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk5rap1Q8BTW8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms