Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mir7071-201ENSMUST00000184847 69 ntBASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3eQ8BRJ4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm26524-201ENSMUST00000192339 390 ntBASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3eQ8BRJ4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp1r3eQ8BRJ4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms