Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rd3Q8BRE0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rd3Q8BRE0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Gm6623-201ENSMUST00000173570 544 ntBASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rd3Q8BRE0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rd3Q8BRE0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Gm11950-201ENSMUST00000121615 838 ntBASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rd3Q8BRE0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Gm28033-201ENSMUST00000184224 96 ntBASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Actl10-202ENSMUST00000226583 1501 ntBASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.17■□□□□ 0.5
Rd3Q8BRE0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms