Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Suds3Q8BR65 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gm10138-203ENSMUST00000206952 366 ntBASIC17.6■□□□□ 0.41
Suds3Q8BR65 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.6■□□□□ 0.41
Suds3Q8BR65 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Suds3Q8BR65 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Gm6576-201ENSMUST00000169678 883 ntBASIC17.59■□□□□ 0.41
Suds3Q8BR65 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.59■□□□□ 0.41
Suds3Q8BR65 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.59■□□□□ 0.41
Suds3Q8BR65 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.59■□□□□ 0.41
Suds3Q8BR65 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Suds3Q8BR65 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.58■□□□□ 0.41
Suds3Q8BR65 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Suds3Q8BR65 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Suds3Q8BR65 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.58■□□□□ 0.41
Suds3Q8BR65 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Suds3Q8BR65 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Suds3Q8BR65 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Gm15375-201ENSMUST00000119510 849 ntBASIC17.58■□□□□ 0.4
Suds3Q8BR65 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Mir7071-201ENSMUST00000184847 69 ntBASIC17.58■□□□□ 0.4
Suds3Q8BR65 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.58■□□□□ 0.4
Suds3Q8BR65 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.58■□□□□ 0.4
Suds3Q8BR65 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Suds3Q8BR65 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms