Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Gm7638-201ENSMUST00000121348 967 ntBASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Gm22697-201ENSMUST00000175194 63 ntBASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Gm37025-201ENSMUST00000195159 829 ntBASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc1Q8BR37 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Golph3-205ENSMUST00000228671 2842 ntBASIC13.31□□□□□ -0.28
Nhlrc1Q8BR37 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nhlrc1Q8BR37 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nhlrc1Q8BR37 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms