Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm7290-201ENSMUST00000104990 617 ntBASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm12918-201ENSMUST00000120234 636 ntBASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm15710-201ENSMUST00000121821 636 ntBASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm5075-201ENSMUST00000196916 622 ntBASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf18Q8BM39 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.33■□□□□ 0.21
Prpf18Q8BM39 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.33■□□□□ 0.21
Prpf18Q8BM39 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf18Q8BM39 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf18Q8BM39 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf18Q8BM39 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Gm6365-201ENSMUST00000054711 744 ntBASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Prpf18Q8BM39 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Gm7291-201ENSMUST00000199147 382 ntBASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf18Q8BM39 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf18Q8BM39 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms