Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmbox1Q8BJA3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmbox1Q8BJA3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmbox1Q8BJA3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Mtag2-201ENSMUST00000058665 714 ntBASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmbox1Q8BJA3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Gm7284-201ENSMUST00000131667 944 ntBASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmbox1Q8BJA3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmbox1Q8BJA3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Gm42545-201ENSMUST00000202755 922 ntBASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmbox1Q8BJA3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Hmbox1Q8BJA3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmbox1Q8BJA3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmbox1Q8BJA3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmbox1Q8BJA3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmbox1Q8BJA3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms