Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Gm10252-201ENSMUST00000209541 832 ntBASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samm50Q8BGH2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Gm6576-201ENSMUST00000169678 883 ntBASIC20.09■□□□□ 0.81
Samm50Q8BGH2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samm50Q8BGH2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Samm50Q8BGH2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Samm50Q8BGH2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.08■□□□□ 0.8
Samm50Q8BGH2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Samm50Q8BGH2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Samm50Q8BGH2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Samm50Q8BGH2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Samm50Q8BGH2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Mir6349-201ENSMUST00000184059 97 ntBASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Gm18025-201ENSMUST00000221733 862 ntBASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.07■□□□□ 0.8
Samm50Q8BGH2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Gm42545-201ENSMUST00000202755 922 ntBASIC20.06■□□□□ 0.8
Samm50Q8BGH2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samm50Q8BGH2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms