Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc116Q80X53 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc116Q80X53 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc116Q80X53 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc116Q80X53 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Gm20760-201ENSMUST00000179197 648 ntBASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc116Q80X53 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms