Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm13401-201ENSMUST00000117074 291 ntBASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh3tc2Q80VA5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3tc2Q80VA5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3tc2Q80VA5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.64■□□□□ 0.58
Sh3tc2Q80VA5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sh3tc2Q80VA5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sh3tc2Q80VA5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sh3tc2Q80VA5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Gm11950-201ENSMUST00000121615 838 ntBASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Mir3081-201ENSMUST00000175305 84 ntBASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms