Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vma21Q78T54 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vma21Q78T54 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Vma21Q78T54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vma21Q78T54 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.01□□□□□ -0.17
Vma21Q78T54 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vma21Q78T54 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14□□□□□ -0.17
Vma21Q78T54 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 Gm13148-201ENSMUST00000118892 745 ntBASIC14□□□□□ -0.17
Vma21Q78T54 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 Gm7292-201ENSMUST00000194706 2527 ntBASIC14□□□□□ -0.17
Vma21Q78T54 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vma21Q78T54 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vma21Q78T54 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vma21Q78T54 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.99□□□□□ -0.17
Vma21Q78T54 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Gm13401-201ENSMUST00000117074 291 ntBASIC13.99□□□□□ -0.17
Vma21Q78T54 Mir6349-201ENSMUST00000184059 97 ntBASIC13.99□□□□□ -0.17
Vma21Q78T54 Gm8495-201ENSMUST00000188740 694 ntBASIC13.99□□□□□ -0.17
Vma21Q78T54 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vma21Q78T54 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vma21Q78T54 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vma21Q78T54 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vma21Q78T54 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vma21Q78T54 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.99□□□□□ -0.17
Vma21Q78T54 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Vma21Q78T54 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.98□□□□□ -0.17
Vma21Q78T54 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Gm11643-201ENSMUST00000119578 864 ntBASIC13.98□□□□□ -0.17
Vma21Q78T54 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.98□□□□□ -0.17
Vma21Q78T54 Gm5408-201ENSMUST00000197998 747 ntBASIC13.98□□□□□ -0.17
Vma21Q78T54 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vma21Q78T54 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vma21Q78T54 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vma21Q78T54 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vma21Q78T54 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vma21Q78T54 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vma21Q78T54 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vma21Q78T54 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms