Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cspg5Q71M36 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Cspg5Q71M36 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg5Q71M36 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.75■□□□□ 0.43
Cspg5Q71M36 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cspg5Q71M36 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.75■□□□□ 0.43
Cspg5Q71M36 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg5Q71M36 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.75■□□□□ 0.43
Cspg5Q71M36 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.74■□□□□ 0.43
Cspg5Q71M36 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cspg5Q71M36 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.74■□□□□ 0.43
Cspg5Q71M36 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Fst-202ENSMUST00000223640 2612 ntBASIC17.73■□□□□ 0.43
Cspg5Q71M36 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.73■□□□□ 0.43
Cspg5Q71M36 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg5Q71M36 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.72■□□□□ 0.43
Cspg5Q71M36 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Gm17661-201ENSMUST00000170317 270 ntBASIC17.72■□□□□ 0.43
Cspg5Q71M36 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Gm4974-201ENSMUST00000209974 875 ntBASIC17.72■□□□□ 0.43
Cspg5Q71M36 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms