Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ddx55Q6ZPL9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Gm18195-201ENSMUST00000207604 706 ntBASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx55Q6ZPL9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ddx55Q6ZPL9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Gm25925-201ENSMUST00000158314 306 ntBASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx55Q6ZPL9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx55Q6ZPL9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Gm27525-201ENSMUST00000184465 107 ntBASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Gm44450-201ENSMUST00000199528 114 ntBASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms