Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.23■□□□□ 0.83
Scn9aQ62205 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn9aQ62205 Gm6296-201ENSMUST00000222599 943 ntBASIC20.23■□□□□ 0.83
Scn9aQ62205 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.23■□□□□ 0.83
Scn9aQ62205 Iqck-206ENSMUST00000208658 2891 ntBASIC20.22■□□□□ 0.83
Scn9aQ62205 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 Gm13186-201ENSMUST00000118031 316 ntBASIC20.22■□□□□ 0.83
Scn9aQ62205 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.22■□□□□ 0.83
Scn9aQ62205 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.22■□□□□ 0.83
Scn9aQ62205 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.22■□□□□ 0.83
Scn9aQ62205 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn9aQ62205 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.22■□□□□ 0.83
Scn9aQ62205 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scn9aQ62205 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.21■□□□□ 0.83
Scn9aQ62205 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.21■□□□□ 0.83
Scn9aQ62205 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.21■□□□□ 0.83
Scn9aQ62205 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.21■□□□□ 0.83
Scn9aQ62205 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn9aQ62205 Phf7-203ENSMUST00000226565 1971 ntBASIC20.2■□□□□ 0.82
Scn9aQ62205 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.2■□□□□ 0.82
Scn9aQ62205 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Rprl3-201ENSMUST00000157400 290 ntBASIC20.2■□□□□ 0.82
Scn9aQ62205 Gm6376-201ENSMUST00000209407 580 ntBASIC20.2■□□□□ 0.82
Scn9aQ62205 Grk6-206ENSMUST00000224995 2971 ntBASIC20.2■□□□□ 0.82
Scn9aQ62205 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn9aQ62205 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn9aQ62205 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Scn9aQ62205 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Gm8000-201ENSMUST00000188378 592 ntBASIC20.19■□□□□ 0.82
Scn9aQ62205 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn9aQ62205 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.18■□□□□ 0.82
Scn9aQ62205 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Gm10060-201ENSMUST00000212002 111 ntBASIC20.18■□□□□ 0.82
Scn9aQ62205 Gm5364-201ENSMUST00000216789 889 ntBASIC20.18■□□□□ 0.82
Scn9aQ62205 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn9aQ62205 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Gm27702-201ENSMUST00000184512 56 ntBASIC20.17■□□□□ 0.82
Scn9aQ62205 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Gm7862-201ENSMUST00000121461 292 ntBASIC20.17■□□□□ 0.82
Scn9aQ62205 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn9aQ62205 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Scn9aQ62205 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.16■□□□□ 0.82
Scn9aQ62205 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Gm27867-201ENSMUST00000184778 125 ntBASIC20.16■□□□□ 0.82
Scn9aQ62205 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.16■□□□□ 0.82
Scn9aQ62205 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms