Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox17Q61473 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.15■□□□□ 0.18
Sox17Q61473 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sox17Q61473 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sox17Q61473 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.14■□□□□ 0.17
Sox17Q61473 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Sox17Q61473 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sox17Q61473 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.14■□□□□ 0.17
Sox17Q61473 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sox17Q61473 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox17Q61473 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Sox17Q61473 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox17Q61473 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Sox17Q61473 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sox17Q61473 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Gm42778-201ENSMUST00000199644 553 ntBASIC16.13■□□□□ 0.17
Sox17Q61473 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sox17Q61473 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.13■□□□□ 0.17
Sox17Q61473 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.13■□□□□ 0.17
Sox17Q61473 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox17Q61473 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.12■□□□□ 0.17
Sox17Q61473 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Sox17Q61473 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sox17Q61473 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.12■□□□□ 0.17
Sox17Q61473 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sox17Q61473 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox17Q61473 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sox17Q61473 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sox17Q61473 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Gm13401-201ENSMUST00000117074 291 ntBASIC16.11■□□□□ 0.17
Sox17Q61473 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sox17Q61473 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.11■□□□□ 0.17
Sox17Q61473 Gm38285-201ENSMUST00000192928 922 ntBASIC16.11■□□□□ 0.17
Sox17Q61473 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Gm7514-201ENSMUST00000209475 934 ntBASIC16.11■□□□□ 0.17
Sox17Q61473 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sox17Q61473 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.11■□□□□ 0.17
Sox17Q61473 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.11■□□□□ 0.17
Sox17Q61473 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sox17Q61473 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.11■□□□□ 0.17
Sox17Q61473 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox17Q61473 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sox17Q61473 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.1■□□□□ 0.17
Sox17Q61473 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
Sox17Q61473 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Sox17Q61473 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox17Q61473 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sox17Q61473 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms