Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Traf4Q61382 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.22■□□□□ 0.03
Traf4Q61382 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.22■□□□□ 0.03
Traf4Q61382 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Traf4Q61382 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Traf4Q61382 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.21■□□□□ 0.03
Traf4Q61382 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Traf4Q61382 Mir6349-201ENSMUST00000184059 97 ntBASIC15.21■□□□□ 0.03
Traf4Q61382 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Traf4Q61382 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.21■□□□□ 0.03
Traf4Q61382 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Traf4Q61382 Haglr-201ENSMUST00000100000 2085 ntBASIC15.21■□□□□ 0.03
Traf4Q61382 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Traf4Q61382 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.21■□□□□ 0.02
Traf4Q61382 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Traf4Q61382 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Traf4Q61382 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Traf4Q61382 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Traf4Q61382 Gm37292-201ENSMUST00000192062 758 ntBASIC15.2■□□□□ 0.02
Traf4Q61382 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.2■□□□□ 0.02
Traf4Q61382 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Traf4Q61382 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Traf4Q61382 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Traf4Q61382 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Traf4Q61382 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.19■□□□□ 0.02
Traf4Q61382 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Gm9987-201ENSMUST00000069768 567 ntBASIC15.19■□□□□ 0.02
Traf4Q61382 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.19■□□□□ 0.02
Traf4Q61382 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Traf4Q61382 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Traf4Q61382 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Traf4Q61382 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.18■□□□□ 0.02
Traf4Q61382 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Traf4Q61382 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 Gm21814-202ENSMUST00000203277 873 ntBASIC15.18■□□□□ 0.02
Traf4Q61382 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.18■□□□□ 0.02
Traf4Q61382 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Traf4Q61382 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.18■□□□□ 0.02
Traf4Q61382 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms