Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.71□□□□□ -0.21
Trav2Q5R1I9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav2Q5R1I9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav2Q5R1I9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav2Q5R1I9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav2Q5R1I9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav2Q5R1I9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Gm17661-201ENSMUST00000170317 270 ntBASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Gm18101-201ENSMUST00000215769 548 ntBASIC13.7□□□□□ -0.22
Trav2Q5R1I9 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav2Q5R1I9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav2Q5R1I9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav2Q5R1I9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms