Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Gm27525-201ENSMUST00000184465 107 ntBASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Rprl3-201ENSMUST00000157400 290 ntBASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Gm27000-201ENSMUST00000182943 842 ntBASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Trav8d-2Q5R1B6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-2Q5R1B6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trav8d-2Q5R1B6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Trav8d-2Q5R1B6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms